The detailed information of tRNA gene sequence


Sequence ID>WENV170020760
Genome IDBBPE01024697
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 99
End posion on genome 191
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatttttatt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGTCGCCTCGAAAGCGATTATTCCCTGTATAAGA
GAATCGAGGGTTCGAATCCCTCTCTCTCCTCCA
Downstream region at tRNA end position 
gctttcgctc
Secondary structure (Cloverleaf model)
>WENV170020760	Ser	CGA
                   t      TCCA gctttcgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TATTCCCTGTATAAGAGAATC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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