The detailed information of tRNA gene sequence


Sequence ID>WENV170020769
Genome IDBBPE01026065
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 248
End posion on genome 342
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctataatat
tRNA gene sequence 
GGAGAAGTACCCAAGTTTGGTCGAAGGGGCGCCCCTGCTAAGGGCGTAGGTCGGCAAACA
CCGGCGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tagaaatatg
Secondary structure (Cloverleaf model)
>WENV170020769	Ser	GCT
                   t      GCCA tagaaatatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T T G A        A      | | | | |     G
  T         A C C C       G A G G G     C
  G           | | |                 T T
  G         A G G G
    T C G A        G     TAGGTCGGCAAACACCGGCGC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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