The detailed information of tRNA gene sequence


Sequence ID>WENV170020779
Genome IDBBPE01027490
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 703
End posion on genome 790
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atatcgccat
tRNA gene sequence 
AGAGGGATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCTCCCTCTACCA
Downstream region at tRNA end position 
caaaatgcnn
Secondary structure (Cloverleaf model)
>WENV170020779	Ser	TGA
                   t      ACCA caaaatgcnn
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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