The detailed information of tRNA gene sequence


Sequence ID>WENV170020789
Genome IDBBPE01028753
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2098
End posion on genome 2024
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catttgtata
tRNA gene sequence 
GGACTCTTAGCTCAGACGGTTAGAGCACCTGACTCATAATCAGGTGGTCGCTGGTTCGAT
CCCAGCAGGCGCCACtc
Downstream region at tRNA end position 
ccaagctgct
Secondary structure (Cloverleaf model)
>WENV170020789	Met	CAT
                   a      ACtc ccaagctgct
                     G - C
                     G - C
                     A   G
                     C   C
                     T + G
                     C - G
                     T - A          C T
                    T     C G A C C     A
      A G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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