The detailed information of tRNA gene sequence


Sequence ID>WENV170020801
Genome IDBBPE01030804
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 836
End posion on genome 911
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCGACTTAGCTCAACTGGTAGAGCAACTGATTTGTAATCAGTAGGTTGCGGGTTCAAGT
CCTGTAGTCGGCACCA
Downstream region at tRNA end position 
tttgtacacg
Secondary structure (Cloverleaf model)
>WENV170020801	Thr	TGT
                   n      ACCA tttgtacacg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T G
                    T     T G T C C     A
      C A A        A      + | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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