The detailed information of tRNA gene sequence


Sequence ID>WENV170020802
Genome IDBBPE01030859
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 369
End posion on genome 295
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctgtctttaa
tRNA gene sequence 
GGGTCTATAGTTTCAATGGTAAAACGTCGCTCTCCAAAAGCGAAGTTGCAGGTTCGACTC
CTGCTGGACCCGCCT
Downstream region at tRNA end position 
tcgtcacgac
Secondary structure (Cloverleaf model)
>WENV170020802	Trp	CCA
                   a      GCCT tcgtcacgac
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T + G
                     A - T          T C
                    T     C G T C C     A
      A A C        A      | | | | |     G
    T       T T T G       G C A G G     C
    G       | | | |                 T T
    G       A A A C
      T A          G     AGTT
                    T - A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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