The detailed information of tRNA gene sequence


Sequence ID>WENV170020814
Genome IDBBPE01033501
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 398
End posion on genome 474
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGCTTCGTAGCTCAGTTGGTTAGAGCAACGTCTTGATAAGGCGAAGGTCCTTGGTTCAAA
TCCAAGTGAAGCCACCA
Downstream region at tRNA end position 
aattaaagtg
Secondary structure (Cloverleaf model)
>WENV170020814	Ile	GAT
                   t      ACCA aattaaagtg
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     G + T          T A
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A   A
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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