The detailed information of tRNA gene sequence


Sequence ID>WENV170020838
Genome IDBBPE01037221
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 230
End posion on genome 139
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctcttatct
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTTGAATGCGGCGGTCTTGAAAACCGCTATTCCGAGAGATCGG
AATCGTGGGTTCGAATCCCACTCTCTCCTCCA
Downstream region at tRNA end position 
aattcttttt
Secondary structure (Cloverleaf model)
>WENV170020838	Ser	TGA
                   t      TCCA aattcttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TATTCCGAGAGATCGGAATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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