The detailed information of tRNA gene sequence


Sequence ID>WENV170020840
Genome IDBBPF01000008
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1730
End posion on genome 1642
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcgaatccc
tRNA gene sequence 
GGAGGGGTGACCGAGTGGCTTAAGGTGCCGCTCTCGAAAAGCGGTGTCATCTCTGGTGAC
CGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ggcaaaggag
Secondary structure (Cloverleaf model)
>WENV170020840	Ser	CGA
                   c      GCCA ggcaaaggag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      T T A        G     TGTCATCTCTGGTGACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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