The detailed information of tRNA gene sequence


Sequence ID>WENV170020843
Genome IDBBPF01000020
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4294
End posion on genome 4369
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaagttttg
tRNA gene sequence 
GCCGGTGTAGCTCAGTGGTTAGAGCAGGGTCTTCATAAGGCCAAGGTCGTTGGTTCGATT
CCAGCCATCGGCACCA
Downstream region at tRNA end position 
tggacctgtg
Secondary structure (Cloverleaf model)
>WENV170020843	Met	CAT
                   g      ACCA tggacctgtg
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     G - C          T T
                    T     C G A C C     A
      T G A        A      | + | | |     G
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTC
                    G   A
                    G - C
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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