The detailed information of tRNA gene sequence


Sequence ID>WENV170020856
Genome IDBBPF01000032
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4324
End posion on genome 4395
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attatcaaat
tRNA gene sequence 
GGGAGTGTCGTTCAATGGCAGGACTCTGGTCTCCAAAACCAGGTATCCAGGTTCGAATCC
TGGCACTCCCGCtc
Downstream region at tRNA end position 
cgttaaaaac
Secondary structure (Cloverleaf model)
>WENV170020856	Trp	CCA
                   t      GCtc cgttaaaaac
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     G G T C C     A
        A A        C      | | | | |     G
      T     C T T G       C C A G G     C
      G     | + | |                 T T
      G     G G A C
        C A        T     GTAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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