The detailed information of tRNA gene sequence


Sequence ID>WENV170020859
Genome IDBBPF01000037
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 8984
End posion on genome 9070
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaacaggccc
tRNA gene sequence 
GGAGGGGTGACCGAGTGGCTTAAGGTGCCGCTCTCGAAAAGCGGTGTCATCTCTGGTGAC
CGTGGGTTCGAATCCCACCCCCTCCGCtt
Downstream region at tRNA end position 
tcgagcggct
Secondary structure (Cloverleaf model)
>WENV170020859	Ser	CGA
                   c      GCtt tcgagcggct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      T T A        G     TGTCATCTCTGGTGACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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