The detailed information of tRNA gene sequence


Sequence ID>WENV170020877
Genome IDBBPF01000148
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 657
End posion on genome 580
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcgaattgtt
tRNA gene sequence 
CGGGATGTAGCTCAGCTTGGCTAGAGCGCACGGTTCGGGACCGTGAGGTCGCTGGTTCAA
ATCCAGTCATCCCGACCA
Downstream region at tRNA end position 
ttttaatgat
Secondary structure (Cloverleaf model)
>WENV170020877	Pro	CGG
                   t      ACCA ttttaatgat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
    T C G A        A      + | | | |     A
  T         C T C G       G C T G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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