The detailed information of tRNA gene sequence


Sequence ID>WENV170020883
Genome IDBBPF01000199
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2366
End posion on genome 2437
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aggggcatac
tRNA gene sequence 
GGGCCCGTGGTATAGCGGTAACACGCGACTATGGCATAGTTGAGTCCGGGGTTCGATTCC
CCGCGGGTCCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020883	Ala	GGC
                   c      ACnn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     G C C C C     A
        G A        G      | | | | |     G
      C     T A T G       C G G G G     C
      G     |   | |                 T T
      G     A C A C
        T A        G     AGTC
                    C - G
                    G + T
                    A - T
                    C - G
                    T - A
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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