The detailed information of tRNA gene sequence


Sequence ID>WENV170020889
Genome IDBBPF01000265
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 460
End posion on genome 385
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
ccaccaaaat
tRNA gene sequence
tACATTCGTAGTTTAATTGGAAAAAACAGCTGTCTTCAAGACCGCAGATGGAGGTTCAAG
TCCTCCCGAGTGCGCCAa
Downstream region at tRNA end position
ataaaaaagc
Secondary structure (Cloverleaf model)
>WENV170020889	SeC	TCA
                   t      CCAa ataaaaaagc
                     t + G
                     A   C
                     C - G
                     A - T
                     T + G
                     T - A
                     C - G
                     G - C          T G
                    T     C C T C C     A
      T A A        A      | | | | |     A
    T       T T T G       G G A G G     C
    G       | | | |                 T T
    G       A A A C
      A A A        A     AGAT
                    G - C
                    C - G
                    T   C
                    G - C
                    T - A
                  C       G
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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