The detailed information of tRNA gene sequence


Sequence ID>WENV170020896
Genome IDBBPF01000342
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4413
End posion on genome 4488
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tcgaatcatg
tRNA gene sequence 
GTGAGTGTGGCCAAGTGGTTAAGGCGCCAGGTTGTGGCCCTGGAGATCGAGGGTTCGAAT
CCCTTCACTCACCCCA
Downstream region at tRNA end position 
tccaaatatc
Secondary structure (Cloverleaf model)
>WENV170020896	His	GTG
                   g      CCCA tccaaatatc
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       A C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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