The detailed information of tRNA gene sequence


Sequence ID>WENV170020907
Genome IDBBPF01000430
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5415
End posion on genome 5320
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggcaagtac
tRNA gene sequence 
GGAGAGATGGCCGAGTCGGTCGAAGGCGGTCGCCTGCTAAGCGATTAAGCGGGACTAAAA
CCTGCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tatatttaaa
Secondary structure (Cloverleaf model)
>WENV170020907	Ser	GCT
                   c      GCCA tatatttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAAGCGGGACTAAAACCTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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