The detailed information of tRNA gene sequence


Sequence ID>WENV170020920
Genome IDBBPF01000501
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 13567
End posion on genome 13479
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttattgtttt
tRNA gene sequence 
GGAGAGGTCGGATAACGGTCATTCCAATGGTTTGCTAAACCATGTCGCCTAACAGCGACT
TGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtcagaattt
Secondary structure (Cloverleaf model)
>WENV170020920	Ser	GCT
                   t      GCCA gtcagaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C A A        C      | | | | |     G
    G       T A G G       G T G G G     C
    G         | | |                 T T
    T       T T C C
      C A          A     GTCGCCTAACAGCGACTT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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