The detailed information of tRNA gene sequence


Sequence ID>WENV170020928
Genome IDBBPF01000581
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1380
End posion on genome 1455
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gaatgtgtag
tRNA gene sequence 
GCCCGGGTGGCGCAATGGTAGCGCAGCCGACTTGTAATCGGCAGGTTAGTGGGTTCGAGT
CCCCTCTCGGGCTCCA
Downstream region at tRNA end position 
aaaaggagca
Secondary structure (Cloverleaf model)
>WENV170020928	Thr	TGT
                   g      TCCA aaaaggagca
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T G
                    T     T C C C C     A
        A A        G      +   | | |     G
      T     C G C G       G T G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     AGGTTA
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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