The detailed information of tRNA gene sequence


Sequence ID>WENV170020941
Genome IDBBPF01000679
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 24409
End posion on genome 24481
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atagtaaaac
tRNA gene sequence 
GGGGGTGTGGTGTCAATGGTAGCACAACGGTCTCCAAAACCGTTAGTCTAGGTTCGAATC
CTTGCACCCCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020941	Trp	CCA
                   c      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T T C C     A
      A A C        G      |   | | |     G
    T       T G T G       C T A G G     C
    G       + | | |                 T T
    G       G C A C
      T A          A     TAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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