The detailed information of tRNA gene sequence


Sequence ID>WENV170020943
Genome IDBBPF01000700
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3311
End posion on genome 3216
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
tttgtactca
tRNA gene sequence
GGAGAGATGGCTGAGCTGGTCGAAGGCGCTCGCCTGGAAAGCGAGTAGATGGGGCAAAAC
CTTGTCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
tattttaaaa
Secondary structure (Cloverleaf model)
>WENV170020943	Ser	GGA
                   a      GCCA tattttaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TAGATGGGGCAAAACCTTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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