The detailed information of tRNA gene sequence


Sequence ID>WENV170020959
Genome IDBBPF01000762
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 21749
End posion on genome 21674
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
atgcttcatt
tRNA gene sequence
ACGGGTGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGCTGGGAGTTCGAGT
CTCTCCACCCGTGCAA
Downstream region at tRNA end position
atttttcaaa
Secondary structure (Cloverleaf model)
>WENV170020959	Trp	CCA
                   t      GCAA atttttcaaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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