The detailed information of tRNA gene sequence


Sequence ID>WENV170020962
Genome IDBBPF01000785
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1649
End posion on genome 1724
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccttcaacgt
tRNA gene sequence 
GGGGCTGTAGCTCAATCGGGAGAGCGTTTGACTGGCAGTCAAAAGGTCGGGGGTTCGAAT
CCCCCCAGCTCCACCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020962	Ala	GGC
                   t      ACCA tnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C C C C C     A
      T A A        A      | | | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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