The detailed information of tRNA gene sequence


Sequence ID>WENV170021008
Genome IDBBPF01001285
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 8247
End posion on genome 8334
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaattatgat
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTCAAACCAGCAGTTTGCTAAACTGCCGTATTCGAAAGAATA
CCGGGGGTTCGAATCCCCCTCTCTCCGCat
Downstream region at tRNA end position 
aaaaatttcg
Secondary structure (Cloverleaf model)
>WENV170021008	Ser	GCT
                   t      GCat aaaaatttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T C A        A     CGTATTCGAAAGAATACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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