The detailed information of tRNA gene sequence


Sequence ID>WENV170021009
Genome IDBBPF01001285
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 8345
End posion on genome 8422
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ataaaaattt
tRNA gene sequence 
CGGGGTGTAGCGTAGCCCGGTTAGCGCGCCTGCTTTGGGAGCAGGAGGTCGTGTGTTCGA
ATCACACCACCCCGACAA
Downstream region at tRNA end position 
aattattacc
Secondary structure (Cloverleaf model)
>WENV170021009	Pro	TGG
                   t      ACAA aattattacc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A C A C     A
    C C G A        A      | | | | |     G
  C         T G C G       G T G T G     C
  G         + | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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