The detailed information of tRNA gene sequence


Sequence ID>WENV170021010
Genome IDBBPF01001285
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9188
End posion on genome 9264
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gaaaaaattt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTAGCGCGCCACGTTCGGGACGTGGAGGCCGTGGGTTCGAA
TCCCGCCACCCCGACCA
Downstream region at tRNA end position 
gttcagacat
Secondary structure (Cloverleaf model)
>WENV170021010	Pro	CGG
                   t      ACCA gttcagacat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T G G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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