The detailed information of tRNA gene sequence


Sequence ID>WENV170021013
Genome IDBBPF01001324
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 256
End posion on genome 182
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tttttcgtcc
tRNA gene sequence 
GGCCCCATCGTCTAACGGTTAGGACACCAGGTTTTCAACCTGGCAATCGGGGTTCGATTC
CCCGTGGGGTCACCA
Downstream region at tRNA end position 
aattagaaat
Secondary structure (Cloverleaf model)
>WENV170021013	Glu	TTC
                   c      ACCA aattagaaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAT
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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