The detailed information of tRNA gene sequence


Sequence ID>WENV170021014
Genome IDBBPF01001345
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4134
End posion on genome 4221
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttattgaat
tRNA gene sequence 
GGAGAGGTGACTGAGTGGCCGAAAGTGGCACACTGCTAATGTGTTAGAGGGTAAAACCTC
TCGAGGGTTCGAATCCCTCCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021014	Ser	GCT
                   t      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    C       A A G T
      C G A        G     TAGAGGGTAAAACCTCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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