The detailed information of tRNA gene sequence


Sequence ID>WENV170021022
Genome IDBBPF01001541
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 8996
End posion on genome 9071
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ccattaaaag
tRNA gene sequence 
GCGCGCGTAGCTTAGTGGTTAGAGCAGGGCTCTTATAAGGCCAAGGCCGCAGGTTCGAAT
CCTGCCGCGCGCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021022	Ile	TAT
                   g      ACCA nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    G       T T C G       G C A G G     C
    G       + | | |                 T T
    T       G A G C
      T A          A     AGGCC
                    G   A
                    G - C
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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