The detailed information of tRNA gene sequence


Sequence ID>WENV170021038
Genome IDBBPF01001709
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 13831
End posion on genome 13906
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcagaagaT
tRNA gene sequence 
AGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGGCCGTTCAAA
TCGGCCCCCCGCCATta
Downstream region at tRNA end position 
ttttacccga
Secondary structure (Cloverleaf model)
>WENV170021038	Met	CAT
                   T      ATta ttttacccga
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C G G C     A
      T G A        A      | | | | |     A
    C       C G A G       G G C C G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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