The detailed information of tRNA gene sequence


Sequence ID>WENV170021045
Genome IDBBPF01001710
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 15280
End posion on genome 15371
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaacccac
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCGCACGACTGGAAATCGTGTTCGGGCTTATACCC
CGACGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttatatagc
Secondary structure (Cloverleaf model)
>WENV170021045	Ser	GGA
                   c      GCCA tttatatagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TTCGGGCTTATACCCCGAC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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