The detailed information of tRNA gene sequence


Sequence ID>WENV170021052
Genome IDBBPF01001807
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 245
End posion on genome 171
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtctcagcg
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGCAGAGCGGCCGGCTCATAACCGGTTGGTCGTAGGTTCGAATC
CTGCCGAGCCCACTA
Downstream region at tRNA end position 
ttgaatcctc
Secondary structure (Cloverleaf model)
>WENV170021052	Met	CAT
                   g      ACTA ttgaatcctc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | + | | |     G
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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