The detailed information of tRNA gene sequence


Sequence ID>WENV170021083
Genome IDBBPF01002203
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3871
End posion on genome 3794
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgttgtatgt
tRNA gene sequence 
CGGGGTATAGCGCAGCTTGGCTAGCGCGCCTGCCTTGGGAGCAGGAGGCCGCAGGTTCGA
ATCCTGCTGCCCCGACCA
Downstream region at tRNA end position 
aaaatttggc
Secondary structure (Cloverleaf model)
>WENV170021083	Pro	TGG
                   t      ACCA aaaatttggc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C G T C C     A
    T C G A        A      | | | | |     G
  T         C G C G       G C A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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