The detailed information of tRNA gene sequence


Sequence ID>WENV170021091
Genome IDBBPF01002311
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5385
End posion on genome 5474
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgagtattt
tRNA gene sequence 
GGAGGCGTGGCTGAGCGGTTTAAAGCAGCATCCTGCTAAGATGTTATCCCGGAAACGGGG
TCGAAGGTTCGAATCCTTCCGCCTCCGCCA
Downstream region at tRNA end position 
attttctccg
Secondary structure (Cloverleaf model)
>WENV170021091	Ser	GCT
                   t      GCCA attttctccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T T C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A A G G     C
    G         | | |                 T T
    T       A A G C
      T T A        A     TATCCCGGAAACGGGGTC
                    G + T
                    C - G
                    A - T
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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