The detailed information of tRNA gene sequence


Sequence ID>WENV170021103
Genome IDBBPF01002509
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1000
End posion on genome 925
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aaaacggctt
tRNA gene sequence 
GCGCCCGTAGCTCAGTGGATAGAGCATCGGTCTTCGGAACCGAGGGTCGTGGGTTCGAAT
CCCTCCGGGCGTGCCA
Downstream region at tRNA end position 
gtttcgaaga
Secondary structure (Cloverleaf model)
>WENV170021103	Arg	TCG
                   t      GCCA gtttcgaaga
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      |   | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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