The detailed information of tRNA gene sequence


Sequence ID>WENV170021104
Genome IDBBPF01002509
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 686
End posion on genome 611
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gctagttgga
tRNA gene sequence 
GGGGCTGTAGCTCAGCCGGGAGAGCGCCTCCTTTGCACGGAGGAGGTCAGGAGTTCGAAT
CTCCTCAGCTCCACCA
Downstream region at tRNA end position 
aaccaggggc
Secondary structure (Cloverleaf model)
>WENV170021104	Ala	TGC
                   a      ACCA aaccaggggc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    C       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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