The detailed information of tRNA gene sequence


Sequence ID>WENV170021108
Genome IDBBPF01002671
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 127
End posion on genome 50
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttagagattT
tRNA gene sequence 
GGGCCCATGGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTCGGTCGTAGGTTCGAG
TCCTACTGGGCCCATCA
Downstream region at tRNA end position 
aataagtttg
Secondary structure (Cloverleaf model)
>WENV170021108	Met	CAT
                   T      ATCA aataagtttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C A T C C     A
      T G A        G      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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