The detailed information of tRNA gene sequence


Sequence ID>WENV170021118
Genome IDBBPF01002819
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3780
End posion on genome 3856
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tagtgtccgt
tRNA gene sequence 
GCCGGAGTAGCTCAATGGTAGAGCAGCGCTTTTGTAAAGCGAAGGTTTTTTGGAGGTTCG
AGTCCTCTCTCCGGCTCtt
Downstream region at tRNA end position 
ttttatggta
Secondary structure (Cloverleaf model)
>WENV170021118	Thr	TGT
                   t      TCtt ttttatggta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T C T C C     A
        A A        A      + | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTTTTTT
                    G   A
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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