The detailed information of tRNA gene sequence


Sequence ID>WENV170021138
Genome IDBBPF01003257
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 98
End posion on genome 23
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aacaaatttt
tRNA gene sequence
GCCGGCGTAGCTCAGCGGTAGTAGCAGGGTCTTCATAAGGCCAAGGTCACAGGTTCGAAT
CCTGTCGTCGGCACCA
Downstream region at tRNA end position
agcgggcgta
Secondary structure (Cloverleaf model)
>WENV170021138	Met	CAT
                   t      ACCA agcgggcgta
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    G       C T C G       A C A G G     C
    G         | | |                 T T
    T       T A G C
      A G          A     AGGTC
                    G   A
                    G - C
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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