The detailed information of tRNA gene sequence


Sequence ID>WENV170021162
Genome IDBBPF01003473
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 23923
End posion on genome 24000
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaatttccat
tRNA gene sequence 
CGGGGTGTAGCTCAGCCCGGTTAGAGTGCACGGTTCGGGACCGTGAAGTCGGCGGTTCAA
ATCCGCCCACCCCGACCA
Downstream region at tRNA end position 
aatgaaacga
Secondary structure (Cloverleaf model)
>WENV170021162	Pro	CGG
                   t      ACCA aatgaaacga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C C G C C     A
    C C G A        A      | | | | |     A
  C         C T C G       G G C G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     AAGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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