The detailed information of tRNA gene sequence


Sequence ID>WENV170021165
Genome IDBBPF01003515
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 334
End posion on genome 249
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataagatatT
tRNA gene sequence 
GGAGGGCTAGTCTAATGGTAAGGCACCTGACTTGAAATCAGGCGGGTGAAAGCCCATGGG
GGTTCGAGTCCCTCGCCCTCCGTCA
Downstream region at tRNA end position 
attcgcataa
Secondary structure (Cloverleaf model)
>WENV170021165	Ser	TGA
                   T      GTCA attcgcataa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T G
                    T     C T C C C     A
        A A        A      | + | | |     G
      T     T C T G       G G G G G     C
      G     | | + |                 T T
      G     A G G C
        T A        A     CGGGTGAAAGCCCAT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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