The detailed information of tRNA gene sequence


Sequence ID>WENV170021166
Genome IDBBPF01003534
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5487
End posion on genome 5560
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgtgctataa
tRNA gene sequence 
GGGCTGGTAGCTCAGTCGGTAGAGTGTCGCCTTGGCATGGCGGAGGCCCCGGGTTCAAAT
CCCGGCCAGTCCACtt
Downstream region at tRNA end position 
tttatnnnnn
Secondary structure (Cloverleaf model)
>WENV170021166	Ala	GGC
                   a      ACtt tttatnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGCC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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