The detailed information of tRNA gene sequence


Sequence ID>WENV170021189
Genome IDBBPF01003774
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3067
End posion on genome 3140
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tctatgagtT
tRNA gene sequence 
GCCCTGGTGGTGTAGGGGCTATCATGTGGGCCTGTCGAGCCCACGACTCGGGTTCAAATC
CCGGCCAGGGCGTtt
Downstream region at tRNA end position 
ttagagggcc
Secondary structure (Cloverleaf model)
>WENV170021189	Asp	GTC
                   T      GTtt ttagagggcc
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
      G G A        G      + | | | |     A
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      T A          G     CGAC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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