The detailed information of tRNA gene sequence


Sequence ID>WENV170021197
Genome IDBBPF01003822
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 44565
End posion on genome 44478
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agatgaagtt
tRNA gene sequence 
GCCCGGGTGGTGGAACTGGTAGACACGCAGGACTTAAAATCCTGTGACCATTGCGGTTGT
GCGGGTTCAAGTCCCGCCCCGGGTACTA
Downstream region at tRNA end position 
ctcaaataaa
Secondary structure (Cloverleaf model)
>WENV170021197	Leu	TAA
                   t      ACTA ctcaaataaa
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGACCATTGCGGTTGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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