The detailed information of tRNA gene sequence


Sequence ID>WENV170021210
Genome IDBBPF01004006
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2216
End posion on genome 2144
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gaattatttg
tRNA gene sequence 
GCCCCTATCGTCTAGAGGTCTAGGACGTCGGGTTCTCAATCCGAAAACCGGGGTTCGATT
CCCCGTGGGGGCGttt
Downstream region at tRNA end position 
gaaggcgaag
Secondary structure (Cloverleaf model)
>WENV170021210	Glu	CTC
                   g      Gttt gaaggcgaag
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     AAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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