The detailed information of tRNA gene sequence


Sequence ID>WENV170021215
Genome IDBBPF01004061
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1075
End posion on genome 1151
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctccggcaga
tRNA gene sequence 
AGCGGGGTGGAGCAATTAGGCAGCTCGCCGGGCTCATAACCCGGAGGTTGCTGGTTCAAG
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
gaagggcggt
Secondary structure (Cloverleaf model)
>WENV170021215	Met	CAT
                   a      ACCA gaagggcggt
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G A C C     A
      T A A        G      | | | | |     A
    T       C G A G       G C T G G     C
    A       | | | |                 T T
    G       G C T C
      G C A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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