The detailed information of tRNA gene sequence


Sequence ID>WENV170021222
Genome IDBBPF01004184
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6598
End posion on genome 6688
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tattggatac
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGTCGAAGGTGCGAAACTCGAAATTTCGTGTCGGTGATGAGCCG
ACCTGGGGTTCGAATCCCTAACTCTCCGCCA
Downstream region at tRNA end position 
gacttttctg
Secondary structure (Cloverleaf model)
>WENV170021222	Ser	CGA
                   c      GCCA gacttttctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       T G G G G     C
    G         | |                   T T
    T       A G G T
      C G A        G     TGTCGGTGATGAGCCGACC
                    C - G
                    G - C
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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