The detailed information of tRNA gene sequence


Sequence ID>WENV170021224
Genome IDBBPF01004246
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1986
End posion on genome 1910
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agagattcat
tRNA gene sequence 
GGGCGCGTAGCTCAGCTGGTTAGAGCGTTACGTTCACATCGTAAAGGCCAATGGTTCGAA
TCCATTCGTGCCCACCA
Downstream region at tRNA end position 
taatgaattt
Secondary structure (Cloverleaf model)
>WENV170021224	Val	CAC
                   t      ACCA taatgaattt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T A
                    T     T T A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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