The detailed information of tRNA gene sequence


Sequence ID>WENV170021227
Genome IDBBPF01004333
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 102
End posion on genome 186
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atcgttgcgg
tRNA gene sequence 
GGAGGAGTCGGATAACTGGCTATTCCGCCGGTCTCGAAAACCGGTGCTTGTAAAGGCTTG
TGGGTTCGAGTCCCACCTCCTCCGCac
Downstream region at tRNA end position 
gaaaaaatat
Secondary structure (Cloverleaf model)
>WENV170021227	Ser	CGA
                   g      GCac gaaaaaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
      C A A        C      | | | | |     G
    T       T A G G       G T G G G     C
    G         | | |                 T T
    G       T T C C
      C T A        G     TGCTTGTAAAGGCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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