The detailed information of tRNA gene sequence


Sequence ID>WENV170021231
Genome IDBBPF01004389
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 10004
End posion on genome 10092
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ccaagtttaa
tRNA gene sequence
GGAGAGGTGCAAGAGTGGTTTAATTGGCGGTCCTGGAAAGACCGTGTGCCTTTACGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021231	Ser	GGA
                   a      GCCn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A A C       G T G G G     C
    G         | | |                 T T
    T       A T T G
      T T A        G     TGTGCCTTTACGGGTACC
                    C - G
                    G - C
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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